Gene : evm_27.TU.AmTr_v1.0_scaffold00034.37 A. trichopoda v1.0
Defline:  (1 of 6) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  35
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00034.37 Secondary Identifier:  ? PAC:31549493
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00034.37 0.5kb upstream 0.5kb upstream 1190 true AmTr_v1.0_scaffold00034: 1814259-1815448 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00034: 1814949-1815448 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 0.5kb downstream 0.5kb downstream 1190 true AmTr_v1.0_scaffold00034: 1813759-1814948 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00034: 1813759-1814258 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 1.0kb upstream 1.0kb upstream 1690 true AmTr_v1.0_scaffold00034: 1814259-1815948 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00034: 1814949-1815948 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 1.0kb downstream 1.0kb downstream 1690 true AmTr_v1.0_scaffold00034: 1813259-1814948 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00034: 1813259-1814258 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 2.0kb upstream 2.0kb upstream 2690 true AmTr_v1.0_scaffold00034: 1814259-1816948 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00034: 1814949-1816948 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 2.0kb downstream 2.0kb downstream 2690 true AmTr_v1.0_scaffold00034: 1812259-1814948 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00034: 1812259-1814258 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 5.0kb upstream 5.0kb upstream 5690 true AmTr_v1.0_scaffold00034: 1814259-1819948 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00034: 1814949-1819948 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 5.0kb downstream 5.0kb downstream 5690 true AmTr_v1.0_scaffold00034: 1809259-1814948 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00034: 1809259-1814258 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 10.0kb upstream 10.0kb upstream 10690 true AmTr_v1.0_scaffold00034: 1814259-1824948 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00034: 1814949-1824948 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 10.0kb downstream 10.0kb downstream 10690 true AmTr_v1.0_scaffold00034: 1804259-1814948 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.37 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00034: 1804259-1814258 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048968 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain