Gene : evm_27.TU.AmTr_v1.0_scaffold00033.251 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11035 - PTPLA DOMAIN PROTEIN Genomic Order:  249
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00033.251 Secondary Identifier:  ? PAC:31561927
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5080 Amborella trichopoda pathologic  
Atrichopoda PWY-6433 Amborella trichopoda pathologic  
Atrichopoda PWY-6598 Amborella trichopoda pathologic  
Atrichopoda PWY-7036 Amborella trichopoda pathologic  
Atrichopoda PWY-7601 Amborella trichopoda pathologic  
Atrichopoda PWY-7606 Amborella trichopoda pathologic  
Atrichopoda PWY-7619 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00033.251 0.5kb upstream 0.5kb upstream 6116 true AmTr_v1.0_scaffold00033: 5472206-5478321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00033: 5472206-5472705 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 0.5kb downstream 0.5kb downstream 6116 true AmTr_v1.0_scaffold00033: 5472706-5478821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00033: 5478322-5478821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 1.0kb upstream 1.0kb upstream 6616 true AmTr_v1.0_scaffold00033: 5471706-5478321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00033: 5471706-5472705 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 1.0kb downstream 1.0kb downstream 6616 true AmTr_v1.0_scaffold00033: 5472706-5479321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00033: 5478322-5479321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 2.0kb upstream 2.0kb upstream 7616 true AmTr_v1.0_scaffold00033: 5470706-5478321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00033: 5470706-5472705 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 2.0kb downstream 2.0kb downstream 7616 true AmTr_v1.0_scaffold00033: 5472706-5480321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00033: 5478322-5480321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 5.0kb upstream 5.0kb upstream 10616 true AmTr_v1.0_scaffold00033: 5467706-5478321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00033: 5467706-5472705 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 5.0kb downstream 5.0kb downstream 10616 true AmTr_v1.0_scaffold00033: 5472706-5483321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00033: 5478322-5483321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 10.0kb upstream 10.0kb upstream 15616 true AmTr_v1.0_scaffold00033: 5462706-5478321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00033: 5462706-5472705 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 10.0kb downstream 10.0kb downstream 15616 true AmTr_v1.0_scaffold00033: 5472706-5488321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.251 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00033: 5478322-5488321 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043901 5273 Angiosperm View MSA
121347400 5274 Embryophyte View MSA
123425989 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain