Gene : evm_27.TU.AmTr_v1.0_scaffold00033.128 A. trichopoda v1.0
Defline:  (1 of 5) PF13359 - DDE superfamily endonuclease (DDE_Tnp_4) Genomic Order:  127
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00033.128 Secondary Identifier:  ? PAC:31561928
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00033.128 0.5kb upstream 0.5kb upstream 1535 true AmTr_v1.0_scaffold00033: 2931725-2933259 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00033: 2932760-2933259 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 0.5kb downstream 0.5kb downstream 1535 true AmTr_v1.0_scaffold00033: 2931225-2932759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00033: 2931225-2931724 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 1.0kb upstream 1.0kb upstream 2035 true AmTr_v1.0_scaffold00033: 2931725-2933759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00033: 2932760-2933759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 1.0kb downstream 1.0kb downstream 2035 true AmTr_v1.0_scaffold00033: 2930725-2932759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00033: 2930725-2931724 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 2.0kb upstream 2.0kb upstream 3035 true AmTr_v1.0_scaffold00033: 2931725-2934759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00033: 2932760-2934759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 2.0kb downstream 2.0kb downstream 3035 true AmTr_v1.0_scaffold00033: 2929725-2932759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00033: 2929725-2931724 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 5.0kb upstream 5.0kb upstream 6035 true AmTr_v1.0_scaffold00033: 2931725-2937759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00033: 2932760-2937759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 5.0kb downstream 5.0kb downstream 6035 true AmTr_v1.0_scaffold00033: 2926725-2932759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00033: 2926725-2931724 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 10.0kb upstream 10.0kb upstream 11035 true AmTr_v1.0_scaffold00033: 2931725-2942759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00033: 2932760-2942759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 10.0kb downstream 10.0kb downstream 11035 true AmTr_v1.0_scaffold00033: 2921725-2932759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.128 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00033: 2921725-2931724 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043716 5273 Angiosperm View MSA
121348117 5274 Embryophyte View MSA
123380731 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain