Gene : evm_27.TU.AmTr_v1.0_scaffold00032.280 A. trichopoda v1.0
Defline:  (1 of 4) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  279
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00032.280 Secondary Identifier:  ? PAC:31559982
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00032.280 0.5kb upstream 0.5kb upstream 25650 true AmTr_v1.0_scaffold00032: 5634785-5660434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00032: 5659935-5660434 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 0.5kb downstream 0.5kb downstream 25650 true AmTr_v1.0_scaffold00032: 5634285-5659934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00032: 5634285-5634784 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 1.0kb upstream 1.0kb upstream 26150 true AmTr_v1.0_scaffold00032: 5634785-5660934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00032: 5659935-5660934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 1.0kb downstream 1.0kb downstream 26150 true AmTr_v1.0_scaffold00032: 5633785-5659934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00032: 5633785-5634784 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 2.0kb upstream 2.0kb upstream 27150 true AmTr_v1.0_scaffold00032: 5634785-5661934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00032: 5659935-5661934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 2.0kb downstream 2.0kb downstream 27150 true AmTr_v1.0_scaffold00032: 5632785-5659934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00032: 5632785-5634784 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 5.0kb upstream 5.0kb upstream 30150 true AmTr_v1.0_scaffold00032: 5634785-5664934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00032: 5659935-5664934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 5.0kb downstream 5.0kb downstream 30150 true AmTr_v1.0_scaffold00032: 5629785-5659934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00032: 5629785-5634784 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 10.0kb upstream 10.0kb upstream 35150 true AmTr_v1.0_scaffold00032: 5634785-5669934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00032: 5659935-5669934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 10.0kb downstream 10.0kb downstream 35150 true AmTr_v1.0_scaffold00032: 5624785-5659934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.280 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00032: 5624785-5634784 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045942 5273 Angiosperm View MSA
121346195 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain