Gene : evm_27.TU.AmTr_v1.0_scaffold00038.242 A. trichopoda v1.0
Defline:  (1 of 1) PTHR31576:SF2 - TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B Genomic Order:  238
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00038.242 Secondary Identifier:  ? PAC:31571044
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00038.242 0.5kb upstream 0.5kb upstream 7516 true AmTr_v1.0_scaffold00038: 5302256-5309771 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00038: 5309272-5309771 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 0.5kb downstream 0.5kb downstream 7516 true AmTr_v1.0_scaffold00038: 5301756-5309271 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00038: 5301756-5302255 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 1.0kb upstream 1.0kb upstream 8016 true AmTr_v1.0_scaffold00038: 5302256-5310271 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00038: 5309272-5310271 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 1.0kb downstream 1.0kb downstream 8016 true AmTr_v1.0_scaffold00038: 5301256-5309271 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00038: 5301256-5302255 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 2.0kb upstream 2.0kb upstream 9016 true AmTr_v1.0_scaffold00038: 5302256-5311271 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00038: 5309272-5311271 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 2.0kb downstream 2.0kb downstream 9016 true AmTr_v1.0_scaffold00038: 5300256-5309271 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00038: 5300256-5302255 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 5.0kb upstream 5.0kb upstream 12016 true AmTr_v1.0_scaffold00038: 5302256-5314271 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00038: 5309272-5314271 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 5.0kb downstream 5.0kb downstream 12016 true AmTr_v1.0_scaffold00038: 5297256-5309271 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00038: 5297256-5302255 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 10.0kb upstream 10.0kb upstream 17016 true AmTr_v1.0_scaffold00038: 5302256-5319271 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00038: 5309272-5319271 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 10.0kb downstream 10.0kb downstream 17016 true AmTr_v1.0_scaffold00038: 5292256-5309271 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.242 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00038: 5292256-5302255 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050673 5273 Angiosperm View MSA
121345414 5274 Embryophyte View MSA
123427215 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain