Gene : evm_27.TU.AmTr_v1.0_scaffold00038.86 A. trichopoda v1.0
Defline:  (1 of 2) 2.4.1.25 - 4-alpha-glucanotransferase / Oligo-1,4-1,4-glucantransferase Genomic Order:  86
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00038.86 Secondary Identifier:  ? PAC:31570975
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6724 Amborella trichopoda pathologic  
Atrichopoda PWY-7238 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00038.86 0.5kb upstream 0.5kb upstream 17705 true AmTr_v1.0_scaffold00038: 2024063-2041767 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00038: 2024063-2024562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 0.5kb downstream 0.5kb downstream 17705 true AmTr_v1.0_scaffold00038: 2024563-2042267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00038: 2041768-2042267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 1.0kb upstream 1.0kb upstream 18205 true AmTr_v1.0_scaffold00038: 2023563-2041767 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00038: 2023563-2024562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 1.0kb downstream 1.0kb downstream 18205 true AmTr_v1.0_scaffold00038: 2024563-2042767 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00038: 2041768-2042767 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 2.0kb upstream 2.0kb upstream 19205 true AmTr_v1.0_scaffold00038: 2022563-2041767 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00038: 2022563-2024562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 2.0kb downstream 2.0kb downstream 19205 true AmTr_v1.0_scaffold00038: 2024563-2043767 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00038: 2041768-2043767 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 5.0kb upstream 5.0kb upstream 22205 true AmTr_v1.0_scaffold00038: 2019563-2041767 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00038: 2019563-2024562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 5.0kb downstream 5.0kb downstream 22205 true AmTr_v1.0_scaffold00038: 2024563-2046767 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00038: 2041768-2046767 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 10.0kb upstream 10.0kb upstream 27205 true AmTr_v1.0_scaffold00038: 2014563-2041767 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00038: 2014563-2024562 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 10.0kb downstream 10.0kb downstream 27205 true AmTr_v1.0_scaffold00038: 2024563-2051767 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.86 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00038: 2041768-2051767 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045486 5273 Angiosperm View MSA
121345018 5274 Embryophyte View MSA
123425111 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain