Gene : evm_27.TU.AmTr_v1.0_scaffold00038.82 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10145 - TRANSCRIPTION ELONGATION FACTOR SPT6 Genomic Order:  82
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00038.82 Secondary Identifier:  ? PAC:31570872
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00038.82 0.5kb upstream 0.5kb upstream 16622 true AmTr_v1.0_scaffold00038: 1926801-1943422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00038: 1942923-1943422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 0.5kb downstream 0.5kb downstream 16622 true AmTr_v1.0_scaffold00038: 1926301-1942922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00038: 1926301-1926800 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 1.0kb upstream 1.0kb upstream 17122 true AmTr_v1.0_scaffold00038: 1926801-1943922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00038: 1942923-1943922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 1.0kb downstream 1.0kb downstream 17122 true AmTr_v1.0_scaffold00038: 1925801-1942922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00038: 1925801-1926800 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 2.0kb upstream 2.0kb upstream 18122 true AmTr_v1.0_scaffold00038: 1926801-1944922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00038: 1942923-1944922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 2.0kb downstream 2.0kb downstream 18122 true AmTr_v1.0_scaffold00038: 1924801-1942922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00038: 1924801-1926800 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 5.0kb upstream 5.0kb upstream 21122 true AmTr_v1.0_scaffold00038: 1926801-1947922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00038: 1942923-1947922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 5.0kb downstream 5.0kb downstream 21122 true AmTr_v1.0_scaffold00038: 1921801-1942922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00038: 1921801-1926800 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 10.0kb upstream 10.0kb upstream 26122 true AmTr_v1.0_scaffold00038: 1926801-1952922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00038: 1942923-1952922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 10.0kb downstream 10.0kb downstream 26122 true AmTr_v1.0_scaffold00038: 1916801-1942922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.82 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00038: 1916801-1926800 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044627 5273 Angiosperm View MSA
121347900 5274 Embryophyte View MSA
123426736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain