Gene : evm_27.TU.AmTr_v1.0_scaffold00038.54 A. trichopoda v1.0
Defline:  (1 of 2) PTHR31403:SF6 - PHOSPHOLIPASE A1-IGAMMA3, CHLOROPLASTIC Genomic Order:  54
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00038.54 Secondary Identifier:  ? PAC:31570941
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda LIPASYN-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-6803 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00038.54 0.5kb upstream 0.5kb upstream 4738 true AmTr_v1.0_scaffold00038: 1390494-1395231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00038: 1390494-1390993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 0.5kb downstream 0.5kb downstream 4738 true AmTr_v1.0_scaffold00038: 1390994-1395731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00038: 1395232-1395731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 1.0kb upstream 1.0kb upstream 5238 true AmTr_v1.0_scaffold00038: 1389994-1395231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00038: 1389994-1390993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 1.0kb downstream 1.0kb downstream 5238 true AmTr_v1.0_scaffold00038: 1390994-1396231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00038: 1395232-1396231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 2.0kb upstream 2.0kb upstream 6238 true AmTr_v1.0_scaffold00038: 1388994-1395231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00038: 1388994-1390993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 2.0kb downstream 2.0kb downstream 6238 true AmTr_v1.0_scaffold00038: 1390994-1397231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00038: 1395232-1397231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 5.0kb upstream 5.0kb upstream 9238 true AmTr_v1.0_scaffold00038: 1385994-1395231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00038: 1385994-1390993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 5.0kb downstream 5.0kb downstream 9238 true AmTr_v1.0_scaffold00038: 1390994-1400231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00038: 1395232-1400231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 10.0kb upstream 10.0kb upstream 14238 true AmTr_v1.0_scaffold00038: 1380994-1395231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00038: 1380994-1390993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 10.0kb downstream 10.0kb downstream 14238 true AmTr_v1.0_scaffold00038: 1390994-1405231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.54 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00038: 1395232-1405231 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045871 5273 Angiosperm View MSA
121350475 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain