Gene : evm_27.TU.AmTr_v1.0_scaffold00038.141 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23342 - N-ACETYLGLUTAMATE SYNTHASE Genomic Order:  138
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00038.141 Secondary Identifier:  ? PAC:31570979
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ARGSYNBSUB-PWY Amborella trichopoda pathologic  
Atrichopoda ARGSYN-PWY Amborella trichopoda pathologic  
Atrichopoda GLUTORN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00038.141 0.5kb upstream 0.5kb upstream 1499 true AmTr_v1.0_scaffold00038: 3532318-3533816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00038: 3532318-3532817 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 0.5kb downstream 0.5kb downstream 1499 true AmTr_v1.0_scaffold00038: 3532818-3534316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00038: 3533817-3534316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 1.0kb upstream 1.0kb upstream 1999 true AmTr_v1.0_scaffold00038: 3531818-3533816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00038: 3531818-3532817 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 1.0kb downstream 1.0kb downstream 1999 true AmTr_v1.0_scaffold00038: 3532818-3534816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00038: 3533817-3534816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 2.0kb upstream 2.0kb upstream 2999 true AmTr_v1.0_scaffold00038: 3530818-3533816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00038: 3530818-3532817 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 2.0kb downstream 2.0kb downstream 2999 true AmTr_v1.0_scaffold00038: 3532818-3535816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00038: 3533817-3535816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 5.0kb upstream 5.0kb upstream 5999 true AmTr_v1.0_scaffold00038: 3527818-3533816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00038: 3527818-3532817 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 5.0kb downstream 5.0kb downstream 5999 true AmTr_v1.0_scaffold00038: 3532818-3538816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00038: 3533817-3538816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 10.0kb upstream 10.0kb upstream 10999 true AmTr_v1.0_scaffold00038: 3522818-3533816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00038: 3522818-3532817 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 10.0kb downstream 10.0kb downstream 10999 true AmTr_v1.0_scaffold00038: 3532818-3543816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.141 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00038: 3533817-3543816 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045485 5273 Angiosperm View MSA
121347525 5274 Embryophyte View MSA
123424020 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain