Gene : evm_27.TU.AmTr_v1.0_scaffold00037.17 A. trichopoda v1.0
Defline:  (1 of 14) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  16
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00037.17 Secondary Identifier:  ? PAC:31556186
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00037.17 0.5kb upstream 0.5kb upstream 94497 true AmTr_v1.0_scaffold00037: 597851-692347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00037: 597851-598350 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 0.5kb downstream 0.5kb downstream 94497 true AmTr_v1.0_scaffold00037: 598351-692847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00037: 692348-692847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 1.0kb upstream 1.0kb upstream 94997 true AmTr_v1.0_scaffold00037: 597351-692347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00037: 597351-598350 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 1.0kb downstream 1.0kb downstream 94997 true AmTr_v1.0_scaffold00037: 598351-693347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00037: 692348-693347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 2.0kb upstream 2.0kb upstream 95997 true AmTr_v1.0_scaffold00037: 596351-692347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00037: 596351-598350 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 2.0kb downstream 2.0kb downstream 95997 true AmTr_v1.0_scaffold00037: 598351-694347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00037: 692348-694347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 5.0kb upstream 5.0kb upstream 98997 true AmTr_v1.0_scaffold00037: 593351-692347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00037: 593351-598350 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 5.0kb downstream 5.0kb downstream 98997 true AmTr_v1.0_scaffold00037: 598351-697347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00037: 692348-697347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 10.0kb upstream 10.0kb upstream 103997 true AmTr_v1.0_scaffold00037: 588351-692347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00037: 588351-598350 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 10.0kb downstream 10.0kb downstream 103997 true AmTr_v1.0_scaffold00037: 598351-702347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.17 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00037: 692348-702347 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045808 5273 Angiosperm View MSA
121347981 5274 Embryophyte View MSA
123380700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain