Gene : evm_27.TU.AmTr_v1.0_scaffold00037.22 A. trichopoda v1.0
Defline:  (1 of 2) PTHR13312 - HIV-INDUCED PROTEIN-7-LIKE PROTEASE Genomic Order:  21
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00037.22 Secondary Identifier:  ? PAC:31556204
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00037.22 0.5kb upstream 0.5kb upstream 49708 true AmTr_v1.0_scaffold00037: 804131-853838 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00037: 804131-804630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 0.5kb downstream 0.5kb downstream 49708 true AmTr_v1.0_scaffold00037: 804631-854338 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00037: 853839-854338 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 1.0kb upstream 1.0kb upstream 50208 true AmTr_v1.0_scaffold00037: 803631-853838 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00037: 803631-804630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 1.0kb downstream 1.0kb downstream 50208 true AmTr_v1.0_scaffold00037: 804631-854838 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00037: 853839-854838 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 2.0kb upstream 2.0kb upstream 51208 true AmTr_v1.0_scaffold00037: 802631-853838 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00037: 802631-804630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 2.0kb downstream 2.0kb downstream 51208 true AmTr_v1.0_scaffold00037: 804631-855838 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00037: 853839-855838 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 5.0kb upstream 5.0kb upstream 54208 true AmTr_v1.0_scaffold00037: 799631-853838 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00037: 799631-804630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 5.0kb downstream 5.0kb downstream 54208 true AmTr_v1.0_scaffold00037: 804631-858838 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00037: 853839-858838 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 10.0kb upstream 10.0kb upstream 59208 true AmTr_v1.0_scaffold00037: 794631-853838 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00037: 794631-804630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 10.0kb downstream 10.0kb downstream 59208 true AmTr_v1.0_scaffold00037: 804631-863838 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.22 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00037: 853839-863838 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046032 5273 Angiosperm View MSA
121345268 5274 Embryophyte View MSA
123424822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain