Gene : evm_27.TU.AmTr_v1.0_scaffold00036.105 A. trichopoda v1.0
Defline:  (1 of 2) 2.1.1.190 - 23S rRNA (uracil(1939)-C(5))-methyltransferase / RNA uridine methyltransferase A Genomic Order:  102
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00036.105 Secondary Identifier:  ? PAC:31554362
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00036.105 0.5kb upstream 0.5kb upstream 32140 true AmTr_v1.0_scaffold00036: 3420077-3452216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00036: 3420077-3420576 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 0.5kb downstream 0.5kb downstream 32140 true AmTr_v1.0_scaffold00036: 3420577-3452716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00036: 3452217-3452716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 1.0kb upstream 1.0kb upstream 32640 true AmTr_v1.0_scaffold00036: 3419577-3452216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00036: 3419577-3420576 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 1.0kb downstream 1.0kb downstream 32640 true AmTr_v1.0_scaffold00036: 3420577-3453216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00036: 3452217-3453216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 2.0kb upstream 2.0kb upstream 33640 true AmTr_v1.0_scaffold00036: 3418577-3452216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00036: 3418577-3420576 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 2.0kb downstream 2.0kb downstream 33640 true AmTr_v1.0_scaffold00036: 3420577-3454216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00036: 3452217-3454216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 5.0kb upstream 5.0kb upstream 36640 true AmTr_v1.0_scaffold00036: 3415577-3452216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00036: 3415577-3420576 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 5.0kb downstream 5.0kb downstream 36640 true AmTr_v1.0_scaffold00036: 3420577-3457216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00036: 3452217-3457216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 10.0kb upstream 10.0kb upstream 41640 true AmTr_v1.0_scaffold00036: 3410577-3452216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00036: 3410577-3420576 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 10.0kb downstream 10.0kb downstream 41640 true AmTr_v1.0_scaffold00036: 3420577-3462216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.105 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00036: 3452217-3462216 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042152 5273 Angiosperm View MSA
121345091 5274 Embryophyte View MSA
123424748 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain