Gene : evm_27.TU.AmTr_v1.0_scaffold00040.33 A. trichopoda v1.0

Defline:  (1 of 3) PF05055 - Protein of unknown function (DUF677) (DUF677) Genomic Order:  33
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00040.33 Secondary Identifier:  ? PAC:31568138

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00040.33 0.5kb upstream 0.5kb upstream 1421 true AmTr_v1.0_scaffold00040: 701286-702706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00040: 702207-702706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 0.5kb downstream 0.5kb downstream 1421 true AmTr_v1.0_scaffold00040: 700786-702206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00040: 700786-701285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 1.0kb upstream 1.0kb upstream 1921 true AmTr_v1.0_scaffold00040: 701286-703206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00040: 702207-703206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 1.0kb downstream 1.0kb downstream 1921 true AmTr_v1.0_scaffold00040: 700286-702206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00040: 700286-701285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 2.0kb upstream 2.0kb upstream 2921 true AmTr_v1.0_scaffold00040: 701286-704206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00040: 702207-704206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 2.0kb downstream 2.0kb downstream 2921 true AmTr_v1.0_scaffold00040: 699286-702206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00040: 699286-701285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 5.0kb upstream 5.0kb upstream 5921 true AmTr_v1.0_scaffold00040: 701286-707206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00040: 702207-707206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 5.0kb downstream 5.0kb downstream 5921 true AmTr_v1.0_scaffold00040: 696286-702206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00040: 696286-701285 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 10.0kb upstream 10.0kb upstream 10921 true AmTr_v1.0_scaffold00040: 701286-712206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00040: 702207-712206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 10.0kb downstream 10.0kb downstream 10921 true AmTr_v1.0_scaffold00040: 691286-702206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.33 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00040: 691286-701285 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051174 5273 Angiosperm View MSA
121347879 5274 Embryophyte View MSA
123380662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain