Gene : evm_27.TU.AmTr_v1.0_scaffold00040.296 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23151:SF56 - DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 1 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL Genomic Order:  291
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00040.296 Secondary Identifier:  ? PAC:31567876
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5173 Amborella trichopoda pathologic  
Atrichopoda PWY-5464 Amborella trichopoda pathologic  
Atrichopoda PYRUVDEHYD-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00040.296 0.5kb upstream 0.5kb upstream 26842 true AmTr_v1.0_scaffold00040: 5112877-5139718 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00040: 5139219-5139718 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 0.5kb downstream 0.5kb downstream 26842 true AmTr_v1.0_scaffold00040: 5112377-5139218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00040: 5112377-5112876 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 1.0kb upstream 1.0kb upstream 27342 true AmTr_v1.0_scaffold00040: 5112877-5140218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00040: 5139219-5140218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 1.0kb downstream 1.0kb downstream 27342 true AmTr_v1.0_scaffold00040: 5111877-5139218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00040: 5111877-5112876 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 2.0kb upstream 2.0kb upstream 28342 true AmTr_v1.0_scaffold00040: 5112877-5141218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00040: 5139219-5141218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 2.0kb downstream 2.0kb downstream 28342 true AmTr_v1.0_scaffold00040: 5110877-5139218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00040: 5110877-5112876 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 5.0kb upstream 5.0kb upstream 31342 true AmTr_v1.0_scaffold00040: 5112877-5144218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00040: 5139219-5144218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 5.0kb downstream 5.0kb downstream 31342 true AmTr_v1.0_scaffold00040: 5107877-5139218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00040: 5107877-5112876 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 10.0kb upstream 10.0kb upstream 36342 true AmTr_v1.0_scaffold00040: 5112877-5149218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00040: 5139219-5149218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 10.0kb downstream 10.0kb downstream 36342 true AmTr_v1.0_scaffold00040: 5102877-5139218 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.296 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00040: 5102877-5112876 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040991 5273 Angiosperm View MSA
121346587 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain