Gene : evm_27.TU.AmTr_v1.0_scaffold00040.281 A. trichopoda v1.0
Defline:  (1 of 24) PF03000 - NPH3 family (NPH3) Genomic Order:  278
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00040.281 Secondary Identifier:  ? PAC:31568019
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00040.281 0.5kb upstream 0.5kb upstream 9250 true AmTr_v1.0_scaffold00040: 4994898-5004147 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00040: 5003648-5004147 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 0.5kb downstream 0.5kb downstream 9250 true AmTr_v1.0_scaffold00040: 4994398-5003647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00040: 4994398-4994897 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 1.0kb upstream 1.0kb upstream 9750 true AmTr_v1.0_scaffold00040: 4994898-5004647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00040: 5003648-5004647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 1.0kb downstream 1.0kb downstream 9750 true AmTr_v1.0_scaffold00040: 4993898-5003647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00040: 4993898-4994897 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 2.0kb upstream 2.0kb upstream 10750 true AmTr_v1.0_scaffold00040: 4994898-5005647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00040: 5003648-5005647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 2.0kb downstream 2.0kb downstream 10750 true AmTr_v1.0_scaffold00040: 4992898-5003647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00040: 4992898-4994897 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 5.0kb upstream 5.0kb upstream 13750 true AmTr_v1.0_scaffold00040: 4994898-5008647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00040: 5003648-5008647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 5.0kb downstream 5.0kb downstream 13750 true AmTr_v1.0_scaffold00040: 4989898-5003647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00040: 4989898-4994897 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 10.0kb upstream 10.0kb upstream 18750 true AmTr_v1.0_scaffold00040: 4994898-5013647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00040: 5003648-5013647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 10.0kb downstream 10.0kb downstream 18750 true AmTr_v1.0_scaffold00040: 4984898-5003647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.281 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00040: 4984898-4994897 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045563 5273 Angiosperm View MSA
121310465 5274 Embryophyte View MSA
123347939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain