Gene : evm_27.TU.AmTr_v1.0_scaffold00040.278 A. trichopoda v1.0
Defline:  (1 of 24) PF00069//PF08263//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  276
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00040.278 Secondary Identifier:  ? PAC:31568129
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00040.278 0.5kb upstream 0.5kb upstream 3158 true AmTr_v1.0_scaffold00040: 4958881-4962038 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00040: 4958881-4959380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 0.5kb downstream 0.5kb downstream 3158 true AmTr_v1.0_scaffold00040: 4959381-4962538 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00040: 4962039-4962538 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 1.0kb upstream 1.0kb upstream 3658 true AmTr_v1.0_scaffold00040: 4958381-4962038 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00040: 4958381-4959380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 1.0kb downstream 1.0kb downstream 3658 true AmTr_v1.0_scaffold00040: 4959381-4963038 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00040: 4962039-4963038 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 2.0kb upstream 2.0kb upstream 4658 true AmTr_v1.0_scaffold00040: 4957381-4962038 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00040: 4957381-4959380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 2.0kb downstream 2.0kb downstream 4658 true AmTr_v1.0_scaffold00040: 4959381-4964038 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00040: 4962039-4964038 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 5.0kb upstream 5.0kb upstream 7658 true AmTr_v1.0_scaffold00040: 4954381-4962038 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00040: 4954381-4959380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 5.0kb downstream 5.0kb downstream 7658 true AmTr_v1.0_scaffold00040: 4959381-4967038 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00040: 4962039-4967038 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 10.0kb upstream 10.0kb upstream 12658 true AmTr_v1.0_scaffold00040: 4949381-4962038 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00040: 4949381-4959380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 10.0kb downstream 10.0kb downstream 12658 true AmTr_v1.0_scaffold00040: 4959381-4972038 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.278 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00040: 4962039-4972038 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047752 5273 Angiosperm View MSA
121348254 5274 Embryophyte View MSA
123380793 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain