Gene : evm_27.TU.AmTr_v1.0_scaffold00041.107 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11599:SF5 - PROTEASOME SUBUNIT BETA TYPE-4 Genomic Order:  104
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00041.107 Secondary Identifier:  ? PAC:31559560
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00041.107 0.5kb upstream 0.5kb upstream 13971 true AmTr_v1.0_scaffold00041: 2332410-2346380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00041: 2345881-2346380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 0.5kb downstream 0.5kb downstream 13971 true AmTr_v1.0_scaffold00041: 2331910-2345880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00041: 2331910-2332409 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 1.0kb upstream 1.0kb upstream 14471 true AmTr_v1.0_scaffold00041: 2332410-2346880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00041: 2345881-2346880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 1.0kb downstream 1.0kb downstream 14471 true AmTr_v1.0_scaffold00041: 2331410-2345880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00041: 2331410-2332409 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 2.0kb upstream 2.0kb upstream 15471 true AmTr_v1.0_scaffold00041: 2332410-2347880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00041: 2345881-2347880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 2.0kb downstream 2.0kb downstream 15471 true AmTr_v1.0_scaffold00041: 2330410-2345880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00041: 2330410-2332409 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 5.0kb upstream 5.0kb upstream 18471 true AmTr_v1.0_scaffold00041: 2332410-2350880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00041: 2345881-2350880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 5.0kb downstream 5.0kb downstream 18471 true AmTr_v1.0_scaffold00041: 2327410-2345880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00041: 2327410-2332409 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 10.0kb upstream 10.0kb upstream 23471 true AmTr_v1.0_scaffold00041: 2332410-2355880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00041: 2345881-2355880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 10.0kb downstream 10.0kb downstream 23471 true AmTr_v1.0_scaffold00041: 2322410-2345880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.107 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00041: 2322410-2332409 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044971 5273 Angiosperm View MSA
121346476 5274 Embryophyte View MSA
123423883 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain