Gene : evm_27.TU.AmTr_v1.0_scaffold00040.99 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23083:SF397 - UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED Genomic Order:  99
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00040.99 Secondary Identifier:  ? PAC:31568131
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7437 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00040.99 0.5kb upstream 0.5kb upstream 17689 true AmTr_v1.0_scaffold00040: 1828206-1845894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00040: 1828206-1828705 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 0.5kb downstream 0.5kb downstream 17689 true AmTr_v1.0_scaffold00040: 1828706-1846394 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00040: 1845895-1846394 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 1.0kb upstream 1.0kb upstream 18189 true AmTr_v1.0_scaffold00040: 1827706-1845894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00040: 1827706-1828705 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 1.0kb downstream 1.0kb downstream 18189 true AmTr_v1.0_scaffold00040: 1828706-1846894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00040: 1845895-1846894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 2.0kb upstream 2.0kb upstream 19189 true AmTr_v1.0_scaffold00040: 1826706-1845894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00040: 1826706-1828705 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 2.0kb downstream 2.0kb downstream 19189 true AmTr_v1.0_scaffold00040: 1828706-1847894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00040: 1845895-1847894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 5.0kb upstream 5.0kb upstream 22189 true AmTr_v1.0_scaffold00040: 1823706-1845894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00040: 1823706-1828705 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 5.0kb downstream 5.0kb downstream 22189 true AmTr_v1.0_scaffold00040: 1828706-1850894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00040: 1845895-1850894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 10.0kb upstream 10.0kb upstream 27189 true AmTr_v1.0_scaffold00040: 1818706-1845894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00040: 1818706-1828705 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 10.0kb downstream 10.0kb downstream 27189 true AmTr_v1.0_scaffold00040: 1828706-1855894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.99 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00040: 1845895-1855894 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044417 5273 Angiosperm View MSA
121347707 5274 Embryophyte View MSA
123428836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain