Gene : evm_27.TU.AmTr_v1.0_scaffold00040.84 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10555:SF122 - SORTING NEXIN 1 Genomic Order:  84
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00040.84 Secondary Identifier:  ? PAC:31568038
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00040.84 0.5kb upstream 0.5kb upstream 10696 true AmTr_v1.0_scaffold00040: 1453888-1464583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00040: 1464084-1464583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 0.5kb downstream 0.5kb downstream 10696 true AmTr_v1.0_scaffold00040: 1453388-1464083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00040: 1453388-1453887 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 1.0kb upstream 1.0kb upstream 11196 true AmTr_v1.0_scaffold00040: 1453888-1465083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00040: 1464084-1465083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 1.0kb downstream 1.0kb downstream 11196 true AmTr_v1.0_scaffold00040: 1452888-1464083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00040: 1452888-1453887 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 2.0kb upstream 2.0kb upstream 12196 true AmTr_v1.0_scaffold00040: 1453888-1466083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00040: 1464084-1466083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 2.0kb downstream 2.0kb downstream 12196 true AmTr_v1.0_scaffold00040: 1451888-1464083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00040: 1451888-1453887 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 5.0kb upstream 5.0kb upstream 15196 true AmTr_v1.0_scaffold00040: 1453888-1469083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00040: 1464084-1469083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 5.0kb downstream 5.0kb downstream 15196 true AmTr_v1.0_scaffold00040: 1448888-1464083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00040: 1448888-1453887 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 10.0kb upstream 10.0kb upstream 20196 true AmTr_v1.0_scaffold00040: 1453888-1474083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00040: 1464084-1474083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 10.0kb downstream 10.0kb downstream 20196 true AmTr_v1.0_scaffold00040: 1443888-1464083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.84 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00040: 1443888-1453887 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045293 5273 Angiosperm View MSA
121345603 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain