Gene : evm_27.TU.AmTr_v1.0_scaffold00040.50 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23088:SF26 - N-CARBAMOYLPUTRESCINE AMIDASE Genomic Order:  50
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00040.50 Secondary Identifier:  ? PAC:31568128
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda POLYAMINSYN3-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-43 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00040.50 0.5kb upstream 0.5kb upstream 6729 true AmTr_v1.0_scaffold00040: 1045213-1051941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00040: 1045213-1045712 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 0.5kb downstream 0.5kb downstream 6729 true AmTr_v1.0_scaffold00040: 1045713-1052441 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00040: 1051942-1052441 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 1.0kb upstream 1.0kb upstream 7229 true AmTr_v1.0_scaffold00040: 1044713-1051941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00040: 1044713-1045712 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 1.0kb downstream 1.0kb downstream 7229 true AmTr_v1.0_scaffold00040: 1045713-1052941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00040: 1051942-1052941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 2.0kb upstream 2.0kb upstream 8229 true AmTr_v1.0_scaffold00040: 1043713-1051941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00040: 1043713-1045712 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 2.0kb downstream 2.0kb downstream 8229 true AmTr_v1.0_scaffold00040: 1045713-1053941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00040: 1051942-1053941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 5.0kb upstream 5.0kb upstream 11229 true AmTr_v1.0_scaffold00040: 1040713-1051941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00040: 1040713-1045712 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 5.0kb downstream 5.0kb downstream 11229 true AmTr_v1.0_scaffold00040: 1045713-1056941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00040: 1051942-1056941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 10.0kb upstream 10.0kb upstream 16229 true AmTr_v1.0_scaffold00040: 1035713-1051941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00040: 1035713-1045712 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 10.0kb downstream 10.0kb downstream 16229 true AmTr_v1.0_scaffold00040: 1045713-1061941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.50 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00040: 1051942-1061941 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048045 5273 Angiosperm View MSA
121345187 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain