Gene : evm_27.TU.AmTr_v1.0_scaffold00040.171 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11071:SF213 - PEPTIDYLPROLYL ISOMERASE DOMAIN AND WD REPEAT-CONTAINING PROTEIN 1 Genomic Order:  170
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00040.171 Secondary Identifier:  ? PAC:31568141
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00040.171 0.5kb upstream 0.5kb upstream 11730 true AmTr_v1.0_scaffold00040: 3003659-3015388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00040: 3014889-3015388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 0.5kb downstream 0.5kb downstream 11730 true AmTr_v1.0_scaffold00040: 3003159-3014888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00040: 3003159-3003658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 1.0kb upstream 1.0kb upstream 12230 true AmTr_v1.0_scaffold00040: 3003659-3015888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00040: 3014889-3015888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 1.0kb downstream 1.0kb downstream 12230 true AmTr_v1.0_scaffold00040: 3002659-3014888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00040: 3002659-3003658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 2.0kb upstream 2.0kb upstream 13230 true AmTr_v1.0_scaffold00040: 3003659-3016888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00040: 3014889-3016888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 2.0kb downstream 2.0kb downstream 13230 true AmTr_v1.0_scaffold00040: 3001659-3014888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00040: 3001659-3003658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 5.0kb upstream 5.0kb upstream 16230 true AmTr_v1.0_scaffold00040: 3003659-3019888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00040: 3014889-3019888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 5.0kb downstream 5.0kb downstream 16230 true AmTr_v1.0_scaffold00040: 2998659-3014888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00040: 2998659-3003658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 10.0kb upstream 10.0kb upstream 21230 true AmTr_v1.0_scaffold00040: 3003659-3024888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00040: 3014889-3024888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 10.0kb downstream 10.0kb downstream 21230 true AmTr_v1.0_scaffold00040: 2993659-3014888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.171 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00040: 2993659-3003658 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041059 5273 Angiosperm View MSA
121344442 5274 Embryophyte View MSA
123425036 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain