Gene : evm_27.TU.AmTr_v1.0_scaffold00040.163 A. trichopoda v1.0
Defline:  (1 of 14) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  162
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00040.163 Secondary Identifier:  ? PAC:31567972
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00040.163 0.5kb upstream 0.5kb upstream 3185 true AmTr_v1.0_scaffold00040: 2862566-2865750 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00040: 2862566-2863065 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 0.5kb downstream 0.5kb downstream 3185 true AmTr_v1.0_scaffold00040: 2863066-2866250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00040: 2865751-2866250 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 1.0kb upstream 1.0kb upstream 3685 true AmTr_v1.0_scaffold00040: 2862066-2865750 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00040: 2862066-2863065 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 1.0kb downstream 1.0kb downstream 3685 true AmTr_v1.0_scaffold00040: 2863066-2866750 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00040: 2865751-2866750 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 2.0kb upstream 2.0kb upstream 4685 true AmTr_v1.0_scaffold00040: 2861066-2865750 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00040: 2861066-2863065 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 2.0kb downstream 2.0kb downstream 4685 true AmTr_v1.0_scaffold00040: 2863066-2867750 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00040: 2865751-2867750 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 5.0kb upstream 5.0kb upstream 7685 true AmTr_v1.0_scaffold00040: 2858066-2865750 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00040: 2858066-2863065 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 5.0kb downstream 5.0kb downstream 7685 true AmTr_v1.0_scaffold00040: 2863066-2870750 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00040: 2865751-2870750 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 10.0kb upstream 10.0kb upstream 12685 true AmTr_v1.0_scaffold00040: 2853066-2865750 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00040: 2853066-2863065 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 10.0kb downstream 10.0kb downstream 12685 true AmTr_v1.0_scaffold00040: 2863066-2875750 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.163 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00040: 2865751-2875750 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049070 5273 Angiosperm View MSA
121311235 5274 Embryophyte View MSA
123348556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain