Gene : evm_27.TU.AmTr_v1.0_scaffold00040.221 A. trichopoda v1.0
Defline:  (1 of 4) PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  220
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00040.221 Secondary Identifier:  ? PAC:31568036
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00040.221 0.5kb upstream 0.5kb upstream 2678 true AmTr_v1.0_scaffold00040: 4045676-4048353 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00040: 4045676-4046175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 0.5kb downstream 0.5kb downstream 2678 true AmTr_v1.0_scaffold00040: 4046176-4048853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00040: 4048354-4048853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 1.0kb upstream 1.0kb upstream 3178 true AmTr_v1.0_scaffold00040: 4045176-4048353 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00040: 4045176-4046175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 1.0kb downstream 1.0kb downstream 3178 true AmTr_v1.0_scaffold00040: 4046176-4049353 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00040: 4048354-4049353 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 2.0kb upstream 2.0kb upstream 4178 true AmTr_v1.0_scaffold00040: 4044176-4048353 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00040: 4044176-4046175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 2.0kb downstream 2.0kb downstream 4178 true AmTr_v1.0_scaffold00040: 4046176-4050353 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00040: 4048354-4050353 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 5.0kb upstream 5.0kb upstream 7178 true AmTr_v1.0_scaffold00040: 4041176-4048353 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00040: 4041176-4046175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 5.0kb downstream 5.0kb downstream 7178 true AmTr_v1.0_scaffold00040: 4046176-4053353 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00040: 4048354-4053353 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 10.0kb upstream 10.0kb upstream 12178 true AmTr_v1.0_scaffold00040: 4036176-4048353 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00040: 4036176-4046175 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 10.0kb downstream 10.0kb downstream 12178 true AmTr_v1.0_scaffold00040: 4046176-4058353 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.221 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00040: 4048354-4058353 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046595 5273 Angiosperm View MSA
121310630 5274 Embryophyte View MSA
123348065 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain