Gene : evm_27.TU.AmTr_v1.0_scaffold00039.53 A. trichopoda v1.0
Defline:  (1 of 1) PTHR31332:SF0 - 7-HYDROXYMETHYL CHLOROPHYLL A REDUCTASE, CHLOROPLASTIC Genomic Order:  52
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00039.53 Secondary Identifier:  ? PAC:31565195
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5068 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00039.53 0.5kb upstream 0.5kb upstream 36102 true AmTr_v1.0_scaffold00039: 1149006-1185107 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00039: 1184608-1185107 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 0.5kb downstream 0.5kb downstream 36102 true AmTr_v1.0_scaffold00039: 1148506-1184607 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00039: 1148506-1149005 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 1.0kb upstream 1.0kb upstream 36602 true AmTr_v1.0_scaffold00039: 1149006-1185607 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00039: 1184608-1185607 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 1.0kb downstream 1.0kb downstream 36602 true AmTr_v1.0_scaffold00039: 1148006-1184607 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00039: 1148006-1149005 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 2.0kb upstream 2.0kb upstream 37602 true AmTr_v1.0_scaffold00039: 1149006-1186607 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00039: 1184608-1186607 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 2.0kb downstream 2.0kb downstream 37602 true AmTr_v1.0_scaffold00039: 1147006-1184607 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00039: 1147006-1149005 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 5.0kb upstream 5.0kb upstream 40602 true AmTr_v1.0_scaffold00039: 1149006-1189607 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00039: 1184608-1189607 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 5.0kb downstream 5.0kb downstream 40602 true AmTr_v1.0_scaffold00039: 1144006-1184607 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00039: 1144006-1149005 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 10.0kb upstream 10.0kb upstream 45602 true AmTr_v1.0_scaffold00039: 1149006-1194607 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00039: 1184608-1194607 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 10.0kb downstream 10.0kb downstream 45602 true AmTr_v1.0_scaffold00039: 1139006-1184607 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.53 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00039: 1139006-1149005 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042244 5273 Angiosperm View MSA
121347616 5274 Embryophyte View MSA
123428400 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain