Gene : evm_27.TU.AmTr_v1.0_scaffold00039.46 A. trichopoda v1.0
Defline:  (1 of 4) 4.2.1.33 - 3-isopropylmalate dehydratase / Isopropylmalate isomerase Genomic Order:  45
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00039.46 Secondary Identifier:  ? PAC:31565127
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda BRANCHED-CHAIN-AA-SYN-PWY Amborella trichopoda pathologic  
Atrichopoda LEUSYN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00039.46 0.5kb upstream 0.5kb upstream 20973 true AmTr_v1.0_scaffold00039: 940579-961551 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00039: 961052-961551 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 0.5kb downstream 0.5kb downstream 20973 true AmTr_v1.0_scaffold00039: 940079-961051 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00039: 940079-940578 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 1.0kb upstream 1.0kb upstream 21473 true AmTr_v1.0_scaffold00039: 940579-962051 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00039: 961052-962051 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 1.0kb downstream 1.0kb downstream 21473 true AmTr_v1.0_scaffold00039: 939579-961051 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00039: 939579-940578 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 2.0kb upstream 2.0kb upstream 22473 true AmTr_v1.0_scaffold00039: 940579-963051 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00039: 961052-963051 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 2.0kb downstream 2.0kb downstream 22473 true AmTr_v1.0_scaffold00039: 938579-961051 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00039: 938579-940578 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 5.0kb upstream 5.0kb upstream 25473 true AmTr_v1.0_scaffold00039: 940579-966051 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00039: 961052-966051 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 5.0kb downstream 5.0kb downstream 25473 true AmTr_v1.0_scaffold00039: 935579-961051 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00039: 935579-940578 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 10.0kb upstream 10.0kb upstream 30473 true AmTr_v1.0_scaffold00039: 940579-971051 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00039: 961052-971051 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 10.0kb downstream 10.0kb downstream 30473 true AmTr_v1.0_scaffold00039: 930579-961051 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.46 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00039: 930579-940578 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain