Gene : evm_27.TU.AmTr_v1.0_scaffold00039.86 A. trichopoda v1.0
Defline:  (1 of 1) PTHR34549:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED Genomic Order:  85
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00039.86 Secondary Identifier:  ? PAC:31565163
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00039.86 0.5kb upstream 0.5kb upstream 2352 true AmTr_v1.0_scaffold00039: 1810091-1812442 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00039: 1811943-1812442 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 0.5kb downstream 0.5kb downstream 2352 true AmTr_v1.0_scaffold00039: 1809591-1811942 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00039: 1809591-1810090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 1.0kb upstream 1.0kb upstream 2852 true AmTr_v1.0_scaffold00039: 1810091-1812942 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00039: 1811943-1812942 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 1.0kb downstream 1.0kb downstream 2852 true AmTr_v1.0_scaffold00039: 1809091-1811942 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00039: 1809091-1810090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 2.0kb upstream 2.0kb upstream 3852 true AmTr_v1.0_scaffold00039: 1810091-1813942 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00039: 1811943-1813942 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 2.0kb downstream 2.0kb downstream 3852 true AmTr_v1.0_scaffold00039: 1808091-1811942 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00039: 1808091-1810090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 5.0kb upstream 5.0kb upstream 6852 true AmTr_v1.0_scaffold00039: 1810091-1816942 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00039: 1811943-1816942 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 5.0kb downstream 5.0kb downstream 6852 true AmTr_v1.0_scaffold00039: 1805091-1811942 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00039: 1805091-1810090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 10.0kb upstream 10.0kb upstream 11852 true AmTr_v1.0_scaffold00039: 1810091-1821942 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00039: 1811943-1821942 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 10.0kb downstream 10.0kb downstream 11852 true AmTr_v1.0_scaffold00039: 1800091-1811942 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.86 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00039: 1800091-1810090 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047877 5273 Angiosperm View MSA
121348572 5274 Embryophyte View MSA
123426677 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain