Gene : evm_27.TU.AmTr_v1.0_scaffold00039.149 A. trichopoda v1.0
Defline:  (1 of 2) PTHR22838:SF3 - WD-REPEAT PROTEIN-LIKE Genomic Order:  146
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00039.149 Secondary Identifier:  ? PAC:31565179
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00039.149 0.5kb upstream 0.5kb upstream 9183 true AmTr_v1.0_scaffold00039: 3206058-3215240 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00039: 3214741-3215240 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 0.5kb downstream 0.5kb downstream 9183 true AmTr_v1.0_scaffold00039: 3205558-3214740 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00039: 3205558-3206057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 1.0kb upstream 1.0kb upstream 9683 true AmTr_v1.0_scaffold00039: 3206058-3215740 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00039: 3214741-3215740 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 1.0kb downstream 1.0kb downstream 9683 true AmTr_v1.0_scaffold00039: 3205058-3214740 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00039: 3205058-3206057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 2.0kb upstream 2.0kb upstream 10683 true AmTr_v1.0_scaffold00039: 3206058-3216740 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00039: 3214741-3216740 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 2.0kb downstream 2.0kb downstream 10683 true AmTr_v1.0_scaffold00039: 3204058-3214740 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00039: 3204058-3206057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 5.0kb upstream 5.0kb upstream 13683 true AmTr_v1.0_scaffold00039: 3206058-3219740 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00039: 3214741-3219740 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 5.0kb downstream 5.0kb downstream 13683 true AmTr_v1.0_scaffold00039: 3201058-3214740 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00039: 3201058-3206057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 10.0kb upstream 10.0kb upstream 18683 true AmTr_v1.0_scaffold00039: 3206058-3224740 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00039: 3214741-3224740 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 10.0kb downstream 10.0kb downstream 18683 true AmTr_v1.0_scaffold00039: 3196058-3214740 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.149 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00039: 3196058-3206057 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043991 5273 Angiosperm View MSA
121310222 5274 Embryophyte View MSA
123426468 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain