Gene : evm_27.TU.AmTr_v1.0_scaffold00039.13 A. trichopoda v1.0
Defline:  (1 of 2) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED Genomic Order:  12
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00039.13 Secondary Identifier:  ? PAC:31565133
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00039.13 0.5kb upstream 0.5kb upstream 1322 true AmTr_v1.0_scaffold00039: 327811-329132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00039: 328633-329132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 0.5kb downstream 0.5kb downstream 1322 true AmTr_v1.0_scaffold00039: 327311-328632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00039: 327311-327810 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 1.0kb upstream 1.0kb upstream 1822 true AmTr_v1.0_scaffold00039: 327811-329632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00039: 328633-329632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 1.0kb downstream 1.0kb downstream 1822 true AmTr_v1.0_scaffold00039: 326811-328632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00039: 326811-327810 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 2.0kb upstream 2.0kb upstream 2822 true AmTr_v1.0_scaffold00039: 327811-330632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00039: 328633-330632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 2.0kb downstream 2.0kb downstream 2822 true AmTr_v1.0_scaffold00039: 325811-328632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00039: 325811-327810 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 5.0kb upstream 5.0kb upstream 5822 true AmTr_v1.0_scaffold00039: 327811-333632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00039: 328633-333632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 5.0kb downstream 5.0kb downstream 5822 true AmTr_v1.0_scaffold00039: 322811-328632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00039: 322811-327810 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 10.0kb upstream 10.0kb upstream 10822 true AmTr_v1.0_scaffold00039: 327811-338632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00039: 328633-338632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 10.0kb downstream 10.0kb downstream 10822 true AmTr_v1.0_scaffold00039: 317811-328632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.13 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00039: 317811-327810 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049278 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain