Gene : evm_27.TU.AmTr_v1.0_scaffold00039.103 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11659 - GLUTAMYL-TRNA GLN AMIDOTRANSFERASE SUBUNIT B MITOCHONDRIAL AND PROKARYOTIC PET112-RELATED Genomic Order:  100
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00039.103 Secondary Identifier:  ? PAC:31565323
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5921 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00039.103 0.5kb upstream 0.5kb upstream 14228 true AmTr_v1.0_scaffold00039: 2233589-2247816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00039: 2233589-2234088 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 0.5kb downstream 0.5kb downstream 14228 true AmTr_v1.0_scaffold00039: 2234089-2248316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00039: 2247817-2248316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 1.0kb upstream 1.0kb upstream 14728 true AmTr_v1.0_scaffold00039: 2233089-2247816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00039: 2233089-2234088 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 1.0kb downstream 1.0kb downstream 14728 true AmTr_v1.0_scaffold00039: 2234089-2248816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00039: 2247817-2248816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 2.0kb upstream 2.0kb upstream 15728 true AmTr_v1.0_scaffold00039: 2232089-2247816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00039: 2232089-2234088 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 2.0kb downstream 2.0kb downstream 15728 true AmTr_v1.0_scaffold00039: 2234089-2249816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00039: 2247817-2249816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 5.0kb upstream 5.0kb upstream 18728 true AmTr_v1.0_scaffold00039: 2229089-2247816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00039: 2229089-2234088 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 5.0kb downstream 5.0kb downstream 18728 true AmTr_v1.0_scaffold00039: 2234089-2252816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00039: 2247817-2252816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 10.0kb upstream 10.0kb upstream 23728 true AmTr_v1.0_scaffold00039: 2224089-2247816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00039: 2224089-2234088 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 10.0kb downstream 10.0kb downstream 23728 true AmTr_v1.0_scaffold00039: 2234089-2257816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.103 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00039: 2247817-2257816 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043391 5273 Angiosperm View MSA
121346505 5274 Embryophyte View MSA
123423998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain