Gene : evm_27.TU.AmTr_v1.0_scaffold00039.188 A. trichopoda v1.0
Defline:  (1 of 2) PTHR10836//PTHR10836:SF46 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE Genomic Order:  184
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00039.188 Secondary Identifier:  ? PAC:31565327
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ANAEROFRUCAT-PWY Amborella trichopoda pathologic  
Atrichopoda ANAGLYCOLYSIS-PWY Amborella trichopoda pathologic  
Atrichopoda GLUCONEO-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-1042 Amborella trichopoda pathologic  
Atrichopoda PWY-5464 Amborella trichopoda pathologic  
Atrichopoda SUCSYN-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00039.188 0.5kb upstream 0.5kb upstream 11488 true AmTr_v1.0_scaffold00039: 4340489-4351976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00039: 4340489-4340988 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 0.5kb downstream 0.5kb downstream 11488 true AmTr_v1.0_scaffold00039: 4340989-4352476 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00039: 4351977-4352476 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 1.0kb upstream 1.0kb upstream 11988 true AmTr_v1.0_scaffold00039: 4339989-4351976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00039: 4339989-4340988 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 1.0kb downstream 1.0kb downstream 11988 true AmTr_v1.0_scaffold00039: 4340989-4352976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00039: 4351977-4352976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 2.0kb upstream 2.0kb upstream 12988 true AmTr_v1.0_scaffold00039: 4338989-4351976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00039: 4338989-4340988 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 2.0kb downstream 2.0kb downstream 12988 true AmTr_v1.0_scaffold00039: 4340989-4353976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00039: 4351977-4353976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 5.0kb upstream 5.0kb upstream 15988 true AmTr_v1.0_scaffold00039: 4335989-4351976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00039: 4335989-4340988 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 5.0kb downstream 5.0kb downstream 15988 true AmTr_v1.0_scaffold00039: 4340989-4356976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00039: 4351977-4356976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 10.0kb upstream 10.0kb upstream 20988 true AmTr_v1.0_scaffold00039: 4330989-4351976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00039: 4330989-4340988 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 10.0kb downstream 10.0kb downstream 20988 true AmTr_v1.0_scaffold00039: 4340989-4361976 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.188 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00039: 4351977-4361976 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain