Gene : evm_27.TU.AmTr_v1.0_scaffold00039.161 A. trichopoda v1.0
Defline:  (1 of 1) 2.3.1.16 - Acetyl-CoA C-acyltransferase / Beta-ketothiolase Genomic Order:  158
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00039.161 Secondary Identifier:  ? PAC:31565215
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5136 Amborella trichopoda pathologic  
Atrichopoda PWY-561 Amborella trichopoda pathologic  
Atrichopoda PWY-6435 Amborella trichopoda pathologic  
Atrichopoda PWY-735 Amborella trichopoda pathologic  
Atrichopoda PWY-7606 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00039.161 0.5kb upstream 0.5kb upstream 13415 true AmTr_v1.0_scaffold00039: 3562246-3575660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00039: 3575161-3575660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 0.5kb downstream 0.5kb downstream 13415 true AmTr_v1.0_scaffold00039: 3561746-3575160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00039: 3561746-3562245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 1.0kb upstream 1.0kb upstream 13915 true AmTr_v1.0_scaffold00039: 3562246-3576160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00039: 3575161-3576160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 1.0kb downstream 1.0kb downstream 13915 true AmTr_v1.0_scaffold00039: 3561246-3575160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00039: 3561246-3562245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 2.0kb upstream 2.0kb upstream 14915 true AmTr_v1.0_scaffold00039: 3562246-3577160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00039: 3575161-3577160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 2.0kb downstream 2.0kb downstream 14915 true AmTr_v1.0_scaffold00039: 3560246-3575160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00039: 3560246-3562245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 5.0kb upstream 5.0kb upstream 17915 true AmTr_v1.0_scaffold00039: 3562246-3580160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00039: 3575161-3580160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 5.0kb downstream 5.0kb downstream 17915 true AmTr_v1.0_scaffold00039: 3557246-3575160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00039: 3557246-3562245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 10.0kb upstream 10.0kb upstream 22915 true AmTr_v1.0_scaffold00039: 3562246-3585160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00039: 3575161-3585160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 10.0kb downstream 10.0kb downstream 22915 true AmTr_v1.0_scaffold00039: 3552246-3575160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00039.161 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00039: 3552246-3562245 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045703 5273 Angiosperm View MSA
121347485 5274 Embryophyte View MSA
123424542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain