Gene : evm_27.TU.AmTr_v1.0_scaffold00044.149 A. trichopoda v1.0
Defline:  (1 of 2) 2.4.1.101 - Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase / 1,2-N-acetylglucosaminyltransferase Genomic Order:  148
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00044.149 Secondary Identifier:  ? PAC:31575575
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7426 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00044.149 0.5kb upstream 0.5kb upstream 16128 true AmTr_v1.0_scaffold00044: 2141096-2157223 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00044: 2156724-2157223 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 0.5kb downstream 0.5kb downstream 16128 true AmTr_v1.0_scaffold00044: 2140596-2156723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00044: 2140596-2141095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 1.0kb upstream 1.0kb upstream 16628 true AmTr_v1.0_scaffold00044: 2141096-2157723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00044: 2156724-2157723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 1.0kb downstream 1.0kb downstream 16628 true AmTr_v1.0_scaffold00044: 2140096-2156723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00044: 2140096-2141095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 2.0kb upstream 2.0kb upstream 17628 true AmTr_v1.0_scaffold00044: 2141096-2158723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00044: 2156724-2158723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 2.0kb downstream 2.0kb downstream 17628 true AmTr_v1.0_scaffold00044: 2139096-2156723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00044: 2139096-2141095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 5.0kb upstream 5.0kb upstream 20628 true AmTr_v1.0_scaffold00044: 2141096-2161723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00044: 2156724-2161723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 5.0kb downstream 5.0kb downstream 20628 true AmTr_v1.0_scaffold00044: 2136096-2156723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00044: 2136096-2141095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 10.0kb upstream 10.0kb upstream 25628 true AmTr_v1.0_scaffold00044: 2141096-2166723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00044: 2156724-2166723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 10.0kb downstream 10.0kb downstream 25628 true AmTr_v1.0_scaffold00044: 2131096-2156723 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.149 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00044: 2131096-2141095 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050416 5273 Angiosperm View MSA
121350019 5274 Embryophyte View MSA
123426685 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain