Gene : evm_27.TU.AmTr_v1.0_scaffold00043.24 A. trichopoda v1.0
Defline:  (1 of 43) PF03514 - GRAS domain family (GRAS) Genomic Order:  24
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00043.24 Secondary Identifier:  ? PAC:31556894
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00043.24 0.5kb upstream 0.5kb upstream 2267 true AmTr_v1.0_scaffold00043: 1916655-1918921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00043: 1918422-1918921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 0.5kb downstream 0.5kb downstream 2267 true AmTr_v1.0_scaffold00043: 1916155-1918421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00043: 1916155-1916654 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 1.0kb upstream 1.0kb upstream 2767 true AmTr_v1.0_scaffold00043: 1916655-1919421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00043: 1918422-1919421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 1.0kb downstream 1.0kb downstream 2767 true AmTr_v1.0_scaffold00043: 1915655-1918421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00043: 1915655-1916654 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 2.0kb upstream 2.0kb upstream 3767 true AmTr_v1.0_scaffold00043: 1916655-1920421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00043: 1918422-1920421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 2.0kb downstream 2.0kb downstream 3767 true AmTr_v1.0_scaffold00043: 1914655-1918421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00043: 1914655-1916654 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 5.0kb upstream 5.0kb upstream 6767 true AmTr_v1.0_scaffold00043: 1916655-1923421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00043: 1918422-1923421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 5.0kb downstream 5.0kb downstream 6767 true AmTr_v1.0_scaffold00043: 1911655-1918421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00043: 1911655-1916654 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 10.0kb upstream 10.0kb upstream 11767 true AmTr_v1.0_scaffold00043: 1916655-1928421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00043: 1918422-1928421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 10.0kb downstream 10.0kb downstream 11767 true AmTr_v1.0_scaffold00043: 1906655-1918421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.24 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00043: 1906655-1916654 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048977 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain