Gene : evm_27.TU.AmTr_v1.0_scaffold00044.119 A. trichopoda v1.0
Defline:  (1 of 2) 1.2.1.13 - Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) / Triosephosphate dehydrogenase (NADP+) Genomic Order:  118
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00044.119 Secondary Identifier:  ? PAC:31575530
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ANAEROFRUCAT-PWY Amborella trichopoda pathologic  
Atrichopoda ANAGLYCOLYSIS-PWY Amborella trichopoda pathologic  
Atrichopoda CALVIN-PWY Amborella trichopoda pathologic  
Atrichopoda GLUCONEO-PWY Amborella trichopoda pathologic  
Atrichopoda PHOTOALL-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-1042 Amborella trichopoda pathologic  
Atrichopoda PWY-5464 Amborella trichopoda pathologic  
Atrichopoda SUCSYN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00044.119 0.5kb upstream 0.5kb upstream 5783 true AmTr_v1.0_scaffold00044: 1804773-1810555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00044: 1804773-1805272 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 0.5kb downstream 0.5kb downstream 5783 true AmTr_v1.0_scaffold00044: 1805273-1811055 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00044: 1810556-1811055 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 1.0kb upstream 1.0kb upstream 6283 true AmTr_v1.0_scaffold00044: 1804273-1810555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00044: 1804273-1805272 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 1.0kb downstream 1.0kb downstream 6283 true AmTr_v1.0_scaffold00044: 1805273-1811555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00044: 1810556-1811555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 2.0kb upstream 2.0kb upstream 7283 true AmTr_v1.0_scaffold00044: 1803273-1810555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00044: 1803273-1805272 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 2.0kb downstream 2.0kb downstream 7283 true AmTr_v1.0_scaffold00044: 1805273-1812555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00044: 1810556-1812555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 5.0kb upstream 5.0kb upstream 10283 true AmTr_v1.0_scaffold00044: 1800273-1810555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00044: 1800273-1805272 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 5.0kb downstream 5.0kb downstream 10283 true AmTr_v1.0_scaffold00044: 1805273-1815555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00044: 1810556-1815555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 10.0kb upstream 10.0kb upstream 15283 true AmTr_v1.0_scaffold00044: 1795273-1810555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00044: 1795273-1805272 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 10.0kb downstream 10.0kb downstream 15283 true AmTr_v1.0_scaffold00044: 1805273-1820555 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.119 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00044: 1810556-1820555 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047323 5273 Angiosperm View MSA
121310728 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain