Gene : evm_27.TU.AmTr_v1.0_scaffold00043.87 A. trichopoda v1.0

Genomic Order:  87 Name:  ? evm_27.TU.AmTr_v1.0_scaffold00043.87
Secondary Identifier:  ? PAC:31556833

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00043.87 0.5kb upstream 0.5kb upstream 2764 true AmTr_v1.0_scaffold00043: 4971112-4973875 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00043: 4973376-4973875 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 0.5kb downstream 0.5kb downstream 2764 true AmTr_v1.0_scaffold00043: 4970612-4973375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00043: 4970612-4971111 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 1.0kb upstream 1.0kb upstream 3264 true AmTr_v1.0_scaffold00043: 4971112-4974375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00043: 4973376-4974375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 1.0kb downstream 1.0kb downstream 3264 true AmTr_v1.0_scaffold00043: 4970112-4973375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00043: 4970112-4971111 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 2.0kb upstream 2.0kb upstream 4264 true AmTr_v1.0_scaffold00043: 4971112-4975375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00043: 4973376-4975375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 2.0kb downstream 2.0kb downstream 4264 true AmTr_v1.0_scaffold00043: 4969112-4973375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00043: 4969112-4971111 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 5.0kb upstream 5.0kb upstream 7264 true AmTr_v1.0_scaffold00043: 4971112-4978375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00043: 4973376-4978375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 5.0kb downstream 5.0kb downstream 7264 true AmTr_v1.0_scaffold00043: 4966112-4973375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00043: 4966112-4971111 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 10.0kb upstream 10.0kb upstream 12264 true AmTr_v1.0_scaffold00043: 4971112-4983375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00043: 4973376-4983375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 10.0kb downstream 10.0kb downstream 12264 true AmTr_v1.0_scaffold00043: 4961112-4973375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.87 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00043: 4961112-4971111 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040602 5273 Angiosperm View MSA
121309495 5274 Embryophyte View MSA
123347160 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain