Gene : evm_27.TU.AmTr_v1.0_scaffold00043.77 A. trichopoda v1.0
Defline:  (1 of 4) 1.6.5.2 - NAD(P)H dehydrogenase (quinone) / Vitamin-K reductase Genomic Order:  77
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00043.77 Secondary Identifier:  ? PAC:31556829
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7279 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00043.77 0.5kb upstream 0.5kb upstream 4846 true AmTr_v1.0_scaffold00043: 4156738-4161583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00043: 4156738-4157237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 0.5kb downstream 0.5kb downstream 4846 true AmTr_v1.0_scaffold00043: 4157238-4162083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00043: 4161584-4162083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 1.0kb upstream 1.0kb upstream 5346 true AmTr_v1.0_scaffold00043: 4156238-4161583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00043: 4156238-4157237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 1.0kb downstream 1.0kb downstream 5346 true AmTr_v1.0_scaffold00043: 4157238-4162583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00043: 4161584-4162583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 2.0kb upstream 2.0kb upstream 6346 true AmTr_v1.0_scaffold00043: 4155238-4161583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00043: 4155238-4157237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 2.0kb downstream 2.0kb downstream 6346 true AmTr_v1.0_scaffold00043: 4157238-4163583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00043: 4161584-4163583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 5.0kb upstream 5.0kb upstream 9346 true AmTr_v1.0_scaffold00043: 4152238-4161583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00043: 4152238-4157237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 5.0kb downstream 5.0kb downstream 9346 true AmTr_v1.0_scaffold00043: 4157238-4166583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00043: 4161584-4166583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 10.0kb upstream 10.0kb upstream 14346 true AmTr_v1.0_scaffold00043: 4147238-4161583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00043: 4147238-4157237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 10.0kb downstream 10.0kb downstream 14346 true AmTr_v1.0_scaffold00043: 4157238-4171583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.77 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00043: 4161584-4171583 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045410 5273 Angiosperm View MSA
121349391 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain