Gene : evm_27.TU.AmTr_v1.0_scaffold00041.43 A. trichopoda v1.0
Defline:  (1 of 1) PTHR21256:SF2 - HISTIDINE BIOSYNTHESIS TRIFUNCTIONAL PROTEIN Genomic Order:  42
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00041.43 Secondary Identifier:  ? PAC:31559591
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda HISTSYN-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00041.43 0.5kb upstream 0.5kb upstream 9967 true AmTr_v1.0_scaffold00041: 781645-791611 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00041: 781645-782144 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 0.5kb downstream 0.5kb downstream 9967 true AmTr_v1.0_scaffold00041: 782145-792111 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00041: 791612-792111 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 1.0kb upstream 1.0kb upstream 10467 true AmTr_v1.0_scaffold00041: 781145-791611 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00041: 781145-782144 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 1.0kb downstream 1.0kb downstream 10467 true AmTr_v1.0_scaffold00041: 782145-792611 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00041: 791612-792611 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 2.0kb upstream 2.0kb upstream 11467 true AmTr_v1.0_scaffold00041: 780145-791611 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00041: 780145-782144 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 2.0kb downstream 2.0kb downstream 11467 true AmTr_v1.0_scaffold00041: 782145-793611 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00041: 791612-793611 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 5.0kb upstream 5.0kb upstream 14467 true AmTr_v1.0_scaffold00041: 777145-791611 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00041: 777145-782144 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 5.0kb downstream 5.0kb downstream 14467 true AmTr_v1.0_scaffold00041: 782145-796611 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00041: 791612-796611 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 10.0kb upstream 10.0kb upstream 19467 true AmTr_v1.0_scaffold00041: 772145-791611 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00041: 772145-782144 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 10.0kb downstream 10.0kb downstream 19467 true AmTr_v1.0_scaffold00041: 782145-801611 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00041.43 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00041: 791612-801611 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046994 5273 Angiosperm View MSA
121351553 5274 Embryophyte View MSA
123424167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain