Gene : evm_27.TU.AmTr_v1.0_scaffold00042.33 A. trichopoda v1.0
Defline:  (1 of 1) KOG0919 - C-5 cytosine-specific DNA methylase Genomic Order:  33
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00042.33 Secondary Identifier:  ? PAC:31564620
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00042.33 0.5kb upstream 0.5kb upstream 18044 true AmTr_v1.0_scaffold00042: 1920996-1939039 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00042: 1920996-1921495 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 0.5kb downstream 0.5kb downstream 18044 true AmTr_v1.0_scaffold00042: 1921496-1939539 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00042: 1939040-1939539 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 1.0kb upstream 1.0kb upstream 18544 true AmTr_v1.0_scaffold00042: 1920496-1939039 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00042: 1920496-1921495 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 1.0kb downstream 1.0kb downstream 18544 true AmTr_v1.0_scaffold00042: 1921496-1940039 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00042: 1939040-1940039 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 2.0kb upstream 2.0kb upstream 19544 true AmTr_v1.0_scaffold00042: 1919496-1939039 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00042: 1919496-1921495 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 2.0kb downstream 2.0kb downstream 19544 true AmTr_v1.0_scaffold00042: 1921496-1941039 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00042: 1939040-1941039 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 5.0kb upstream 5.0kb upstream 22544 true AmTr_v1.0_scaffold00042: 1916496-1939039 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00042: 1916496-1921495 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 5.0kb downstream 5.0kb downstream 22544 true AmTr_v1.0_scaffold00042: 1921496-1944039 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00042: 1939040-1944039 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 10.0kb upstream 10.0kb upstream 27544 true AmTr_v1.0_scaffold00042: 1911496-1939039 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00042: 1911496-1921495 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 10.0kb downstream 10.0kb downstream 27544 true AmTr_v1.0_scaffold00042: 1921496-1949039 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00042.33 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00042: 1939040-1949039 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042989 5273 Angiosperm View MSA
121345070 5274 Embryophyte View MSA
123423972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain