Gene : evm_27.TU.AmTr_v1.0_scaffold00045.82 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11735:SF14 - TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE-RELATED Genomic Order:  81
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00045.82 Secondary Identifier:  ? PAC:31567693
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY0-1587 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00045.82 0.5kb upstream 0.5kb upstream 5039 true AmTr_v1.0_scaffold00045: 1054394-1059432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00045: 1058933-1059432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 0.5kb downstream 0.5kb downstream 5039 true AmTr_v1.0_scaffold00045: 1053894-1058932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00045: 1053894-1054393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 1.0kb upstream 1.0kb upstream 5539 true AmTr_v1.0_scaffold00045: 1054394-1059932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00045: 1058933-1059932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 1.0kb downstream 1.0kb downstream 5539 true AmTr_v1.0_scaffold00045: 1053394-1058932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00045: 1053394-1054393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 2.0kb upstream 2.0kb upstream 6539 true AmTr_v1.0_scaffold00045: 1054394-1060932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00045: 1058933-1060932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 2.0kb downstream 2.0kb downstream 6539 true AmTr_v1.0_scaffold00045: 1052394-1058932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00045: 1052394-1054393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 5.0kb upstream 5.0kb upstream 9539 true AmTr_v1.0_scaffold00045: 1054394-1063932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00045: 1058933-1063932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 5.0kb downstream 5.0kb downstream 9539 true AmTr_v1.0_scaffold00045: 1049394-1058932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00045: 1049394-1054393 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 10.0kb upstream 10.0kb upstream 14539 true AmTr_v1.0_scaffold00045: 1054394-1068932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00045: 1058933-1068932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 10.0kb downstream 10.0kb downstream 14539 true AmTr_v1.0_scaffold00045: 1044394-1058932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.82 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00045: 1044394-1054393 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043416 5273 Angiosperm View MSA
121345797 5274 Embryophyte View MSA
123425080 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain