Gene : evm_27.TU.AmTr_v1.0_scaffold00046.151 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  151
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00046.151 Secondary Identifier:  ? PAC:31553450
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLYSYN-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-2161 Amborella trichopoda pathologic  
Atrichopoda PWY-3841 Amborella trichopoda pathologic  
Atrichopoda SER-GLYSYN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00046.151 0.5kb upstream 0.5kb upstream 9655 true AmTr_v1.0_scaffold00046: 4406841-4416495 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00046: 4415996-4416495 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 0.5kb downstream 0.5kb downstream 9655 true AmTr_v1.0_scaffold00046: 4406341-4415995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00046: 4406341-4406840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 1.0kb upstream 1.0kb upstream 10155 true AmTr_v1.0_scaffold00046: 4406841-4416995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00046: 4415996-4416995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 1.0kb downstream 1.0kb downstream 10155 true AmTr_v1.0_scaffold00046: 4405841-4415995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00046: 4405841-4406840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 2.0kb upstream 2.0kb upstream 11155 true AmTr_v1.0_scaffold00046: 4406841-4417995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00046: 4415996-4417995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 2.0kb downstream 2.0kb downstream 11155 true AmTr_v1.0_scaffold00046: 4404841-4415995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00046: 4404841-4406840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 5.0kb upstream 5.0kb upstream 14155 true AmTr_v1.0_scaffold00046: 4406841-4420995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00046: 4415996-4420995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 5.0kb downstream 5.0kb downstream 14155 true AmTr_v1.0_scaffold00046: 4401841-4415995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00046: 4401841-4406840 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 10.0kb upstream 10.0kb upstream 19155 true AmTr_v1.0_scaffold00046: 4406841-4425995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00046: 4415996-4425995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 10.0kb downstream 10.0kb downstream 19155 true AmTr_v1.0_scaffold00046: 4396841-4415995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.151 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00046: 4396841-4406840 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain