Gene : evm_27.TU.AmTr_v1.0_scaffold00045.281 A. trichopoda v1.0
Defline:  (1 of 274) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  280
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00045.281 Secondary Identifier:  ? PAC:31567547
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00045.281 0.5kb upstream 0.5kb upstream 7755 true AmTr_v1.0_scaffold00045: 3984177-3991931 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00045: 3991432-3991931 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 0.5kb downstream 0.5kb downstream 7755 true AmTr_v1.0_scaffold00045: 3983677-3991431 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00045: 3983677-3984176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 1.0kb upstream 1.0kb upstream 8255 true AmTr_v1.0_scaffold00045: 3984177-3992431 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00045: 3991432-3992431 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 1.0kb downstream 1.0kb downstream 8255 true AmTr_v1.0_scaffold00045: 3983177-3991431 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00045: 3983177-3984176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 2.0kb upstream 2.0kb upstream 9255 true AmTr_v1.0_scaffold00045: 3984177-3993431 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00045: 3991432-3993431 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 2.0kb downstream 2.0kb downstream 9255 true AmTr_v1.0_scaffold00045: 3982177-3991431 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00045: 3982177-3984176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 5.0kb upstream 5.0kb upstream 12255 true AmTr_v1.0_scaffold00045: 3984177-3996431 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00045: 3991432-3996431 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 5.0kb downstream 5.0kb downstream 12255 true AmTr_v1.0_scaffold00045: 3979177-3991431 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00045: 3979177-3984176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 10.0kb upstream 10.0kb upstream 17255 true AmTr_v1.0_scaffold00045: 3984177-4001431 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00045: 3991432-4001431 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 10.0kb downstream 10.0kb downstream 17255 true AmTr_v1.0_scaffold00045: 3974177-3991431 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.281 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00045: 3974177-3984176 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042185 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain