Gene : evm_27.TU.AmTr_v1.0_scaffold00045.274 A. trichopoda v1.0
Defline:  (1 of 2) PF05755 - Rubber elongation factor protein (REF) (REF) Genomic Order:  273
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00045.274 Secondary Identifier:  ? PAC:31567598
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00045.274 0.5kb upstream 0.5kb upstream 1945 true AmTr_v1.0_scaffold00045: 3925601-3927545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00045: 3925601-3926100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 0.5kb downstream 0.5kb downstream 1945 true AmTr_v1.0_scaffold00045: 3926101-3928045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00045: 3927546-3928045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 1.0kb upstream 1.0kb upstream 2445 true AmTr_v1.0_scaffold00045: 3925101-3927545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00045: 3925101-3926100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 1.0kb downstream 1.0kb downstream 2445 true AmTr_v1.0_scaffold00045: 3926101-3928545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00045: 3927546-3928545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 2.0kb upstream 2.0kb upstream 3445 true AmTr_v1.0_scaffold00045: 3924101-3927545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00045: 3924101-3926100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 2.0kb downstream 2.0kb downstream 3445 true AmTr_v1.0_scaffold00045: 3926101-3929545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00045: 3927546-3929545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 5.0kb upstream 5.0kb upstream 6445 true AmTr_v1.0_scaffold00045: 3921101-3927545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00045: 3921101-3926100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 5.0kb downstream 5.0kb downstream 6445 true AmTr_v1.0_scaffold00045: 3926101-3932545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00045: 3927546-3932545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 10.0kb upstream 10.0kb upstream 11445 true AmTr_v1.0_scaffold00045: 3916101-3927545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00045: 3916101-3926100 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 10.0kb downstream 10.0kb downstream 11445 true AmTr_v1.0_scaffold00045: 3926101-3937545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.274 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00045: 3927546-3937545 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043264 5273 Angiosperm View MSA
121343982 5274 Embryophyte View MSA
123379951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain