Gene : evm_27.TU.AmTr_v1.0_scaffold00045.254 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11777:SF7 - THREONYL AND ALANYL TRNA SYNTHETASE SECOND ADDITIONAL DOMAIN-CONTAINING PROTEIN Genomic Order:  253
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00045.254 Secondary Identifier:  ? PAC:31567721
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda TRNA-CHARGING-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00045.254 0.5kb upstream 0.5kb upstream 31048 true AmTr_v1.0_scaffold00045: 3592414-3623461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00045: 3622962-3623461 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 0.5kb downstream 0.5kb downstream 31048 true AmTr_v1.0_scaffold00045: 3591914-3622961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00045: 3591914-3592413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 1.0kb upstream 1.0kb upstream 31548 true AmTr_v1.0_scaffold00045: 3592414-3623961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00045: 3622962-3623961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 1.0kb downstream 1.0kb downstream 31548 true AmTr_v1.0_scaffold00045: 3591414-3622961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00045: 3591414-3592413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 2.0kb upstream 2.0kb upstream 32548 true AmTr_v1.0_scaffold00045: 3592414-3624961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00045: 3622962-3624961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 2.0kb downstream 2.0kb downstream 32548 true AmTr_v1.0_scaffold00045: 3590414-3622961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00045: 3590414-3592413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 5.0kb upstream 5.0kb upstream 35548 true AmTr_v1.0_scaffold00045: 3592414-3627961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00045: 3622962-3627961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 5.0kb downstream 5.0kb downstream 35548 true AmTr_v1.0_scaffold00045: 3587414-3622961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00045: 3587414-3592413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 10.0kb upstream 10.0kb upstream 40548 true AmTr_v1.0_scaffold00045: 3592414-3632961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00045: 3622962-3632961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 10.0kb downstream 10.0kb downstream 40548 true AmTr_v1.0_scaffold00045: 3582414-3622961 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.254 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00045: 3582414-3592413 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041267 5273 Angiosperm View MSA
121346902 5274 Embryophyte View MSA
123425374 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain