Gene : evm_27.TU.AmTr_v1.0_scaffold00045.190 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10381:SF12 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 5, CHLOROPLASTIC Genomic Order:  189
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00045.190 Secondary Identifier:  ? PAC:31567605
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00045.190 0.5kb upstream 0.5kb upstream 7248 true AmTr_v1.0_scaffold00045: 2607020-2614267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00045: 2607020-2607519 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 0.5kb downstream 0.5kb downstream 7248 true AmTr_v1.0_scaffold00045: 2607520-2614767 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00045: 2614268-2614767 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 1.0kb upstream 1.0kb upstream 7748 true AmTr_v1.0_scaffold00045: 2606520-2614267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00045: 2606520-2607519 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 1.0kb downstream 1.0kb downstream 7748 true AmTr_v1.0_scaffold00045: 2607520-2615267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00045: 2614268-2615267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 2.0kb upstream 2.0kb upstream 8748 true AmTr_v1.0_scaffold00045: 2605520-2614267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00045: 2605520-2607519 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 2.0kb downstream 2.0kb downstream 8748 true AmTr_v1.0_scaffold00045: 2607520-2616267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00045: 2614268-2616267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 5.0kb upstream 5.0kb upstream 11748 true AmTr_v1.0_scaffold00045: 2602520-2614267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00045: 2602520-2607519 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 5.0kb downstream 5.0kb downstream 11748 true AmTr_v1.0_scaffold00045: 2607520-2619267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00045: 2614268-2619267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 10.0kb upstream 10.0kb upstream 16748 true AmTr_v1.0_scaffold00045: 2597520-2614267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00045: 2597520-2607519 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 10.0kb downstream 10.0kb downstream 16748 true AmTr_v1.0_scaffold00045: 2607520-2624267 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.190 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00045: 2614268-2624267 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043333 5273 Angiosperm View MSA
121344238 5274 Embryophyte View MSA
123424888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain