Gene : evm_27.TU.AmTr_v1.0_scaffold00045.172 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23198:SF4 - NUCLEOPORIN AUTOPEPTIDASE Genomic Order:  171
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00045.172 Secondary Identifier:  ? PAC:31567501
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00045.172 0.5kb upstream 0.5kb upstream 10941 true AmTr_v1.0_scaffold00045: 2399993-2410933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00045: 2399993-2400492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 0.5kb downstream 0.5kb downstream 10941 true AmTr_v1.0_scaffold00045: 2400493-2411433 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00045: 2410934-2411433 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 1.0kb upstream 1.0kb upstream 11441 true AmTr_v1.0_scaffold00045: 2399493-2410933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00045: 2399493-2400492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 1.0kb downstream 1.0kb downstream 11441 true AmTr_v1.0_scaffold00045: 2400493-2411933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00045: 2410934-2411933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 2.0kb upstream 2.0kb upstream 12441 true AmTr_v1.0_scaffold00045: 2398493-2410933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00045: 2398493-2400492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 2.0kb downstream 2.0kb downstream 12441 true AmTr_v1.0_scaffold00045: 2400493-2412933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00045: 2410934-2412933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 5.0kb upstream 5.0kb upstream 15441 true AmTr_v1.0_scaffold00045: 2395493-2410933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00045: 2395493-2400492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 5.0kb downstream 5.0kb downstream 15441 true AmTr_v1.0_scaffold00045: 2400493-2415933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00045: 2410934-2415933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 10.0kb upstream 10.0kb upstream 20441 true AmTr_v1.0_scaffold00045: 2390493-2410933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00045: 2390493-2400492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 10.0kb downstream 10.0kb downstream 20441 true AmTr_v1.0_scaffold00045: 2400493-2420933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.172 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00045: 2410934-2420933 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain