Gene : evm_27.TU.AmTr_v1.0_scaffold00045.147 A. trichopoda v1.0
Defline:  (1 of 1) KOG4519 - Phosphomevalonate kinase Genomic Order:  146
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00045.147 Secondary Identifier:  ? PAC:31567528
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5910 Amborella trichopoda pathologic  
Atrichopoda PWY-922 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00045.147 0.5kb upstream 0.5kb upstream 10769 true AmTr_v1.0_scaffold00045: 2042620-2053388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00045: 2042620-2043119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 0.5kb downstream 0.5kb downstream 10769 true AmTr_v1.0_scaffold00045: 2043120-2053888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00045: 2053389-2053888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 1.0kb upstream 1.0kb upstream 11269 true AmTr_v1.0_scaffold00045: 2042120-2053388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00045: 2042120-2043119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 1.0kb downstream 1.0kb downstream 11269 true AmTr_v1.0_scaffold00045: 2043120-2054388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00045: 2053389-2054388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 2.0kb upstream 2.0kb upstream 12269 true AmTr_v1.0_scaffold00045: 2041120-2053388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00045: 2041120-2043119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 2.0kb downstream 2.0kb downstream 12269 true AmTr_v1.0_scaffold00045: 2043120-2055388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00045: 2053389-2055388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 5.0kb upstream 5.0kb upstream 15269 true AmTr_v1.0_scaffold00045: 2038120-2053388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00045: 2038120-2043119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 5.0kb downstream 5.0kb downstream 15269 true AmTr_v1.0_scaffold00045: 2043120-2058388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00045: 2053389-2058388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 10.0kb upstream 10.0kb upstream 20269 true AmTr_v1.0_scaffold00045: 2033120-2053388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00045: 2033120-2043119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 10.0kb downstream 10.0kb downstream 20269 true AmTr_v1.0_scaffold00045: 2043120-2063388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.147 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00045: 2053389-2063388 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043495 5273 Angiosperm View MSA
121345412 5274 Embryophyte View MSA
123380212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain