Gene : evm_27.TU.AmTr_v1.0_scaffold00045.239 A. trichopoda v1.0
Defline:  (1 of 1) 4.2.1.55 - 3-hydroxybutyryl-CoA dehydratase / Crotonase Genomic Order:  238
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00045.239 Secondary Identifier:  ? PAC:31567685
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ILEUDEG-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-5136 Amborella trichopoda pathologic  
Atrichopoda PWY-5137 Amborella trichopoda pathologic  
Atrichopoda PWY-5138 Amborella trichopoda pathologic  
Atrichopoda PWY-561 Amborella trichopoda pathologic  
Atrichopoda PWY-6435 Amborella trichopoda pathologic  
Atrichopoda PWY-6837 Amborella trichopoda pathologic  
Atrichopoda PWY-7036 Amborella trichopoda pathologic  
Atrichopoda PWY-735 Amborella trichopoda pathologic  
Atrichopoda PWY-7606 Amborella trichopoda pathologic  
Atrichopoda VALDEG-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00045.239 0.5kb upstream 0.5kb upstream 12205 true AmTr_v1.0_scaffold00045: 3356499-3368703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00045: 3356499-3356998 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 0.5kb downstream 0.5kb downstream 12205 true AmTr_v1.0_scaffold00045: 3356999-3369203 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00045: 3368704-3369203 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 1.0kb upstream 1.0kb upstream 12705 true AmTr_v1.0_scaffold00045: 3355999-3368703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00045: 3355999-3356998 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 1.0kb downstream 1.0kb downstream 12705 true AmTr_v1.0_scaffold00045: 3356999-3369703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00045: 3368704-3369703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 2.0kb upstream 2.0kb upstream 13705 true AmTr_v1.0_scaffold00045: 3354999-3368703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00045: 3354999-3356998 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 2.0kb downstream 2.0kb downstream 13705 true AmTr_v1.0_scaffold00045: 3356999-3370703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00045: 3368704-3370703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 5.0kb upstream 5.0kb upstream 16705 true AmTr_v1.0_scaffold00045: 3351999-3368703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00045: 3351999-3356998 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 5.0kb downstream 5.0kb downstream 16705 true AmTr_v1.0_scaffold00045: 3356999-3373703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00045: 3368704-3373703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 10.0kb upstream 10.0kb upstream 21705 true AmTr_v1.0_scaffold00045: 3346999-3368703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00045: 3346999-3356998 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 10.0kb downstream 10.0kb downstream 21705 true AmTr_v1.0_scaffold00045: 3356999-3378703 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.239 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00045: 3368704-3378703 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047259 5273 Angiosperm View MSA
121345387 5274 Embryophyte View MSA
123424743 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain