Gene : evm_27.TU.AmTr_v1.0_scaffold00045.233 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10791//PTHR10791:SF35 - RAG1-ACTIVATING PROTEIN 1 Genomic Order:  232
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00045.233 Secondary Identifier:  ? PAC:31567621
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00045.233 0.5kb upstream 0.5kb upstream 8283 true AmTr_v1.0_scaffold00045: 3219714-3227996 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00045: 3227497-3227996 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 0.5kb downstream 0.5kb downstream 8283 true AmTr_v1.0_scaffold00045: 3219214-3227496 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00045: 3219214-3219713 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 1.0kb upstream 1.0kb upstream 8783 true AmTr_v1.0_scaffold00045: 3219714-3228496 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00045: 3227497-3228496 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 1.0kb downstream 1.0kb downstream 8783 true AmTr_v1.0_scaffold00045: 3218714-3227496 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00045: 3218714-3219713 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 2.0kb upstream 2.0kb upstream 9783 true AmTr_v1.0_scaffold00045: 3219714-3229496 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00045: 3227497-3229496 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 2.0kb downstream 2.0kb downstream 9783 true AmTr_v1.0_scaffold00045: 3217714-3227496 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00045: 3217714-3219713 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 5.0kb upstream 5.0kb upstream 12783 true AmTr_v1.0_scaffold00045: 3219714-3232496 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00045: 3227497-3232496 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 5.0kb downstream 5.0kb downstream 12783 true AmTr_v1.0_scaffold00045: 3214714-3227496 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00045: 3214714-3219713 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 10.0kb upstream 10.0kb upstream 17783 true AmTr_v1.0_scaffold00045: 3219714-3237496 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00045: 3227497-3237496 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 10.0kb downstream 10.0kb downstream 17783 true AmTr_v1.0_scaffold00045: 3209714-3227496 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.233 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00045: 3209714-3219713 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043077 5273 Angiosperm View MSA
121350795 5274 Embryophyte View MSA
123428840 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain