Gene : evm_27.TU.AmTr_v1.0_scaffold00044.7 A. trichopoda v1.0

Genomic Order:  7 Name:  ? evm_27.TU.AmTr_v1.0_scaffold00044.7
Secondary Identifier:  ? PAC:31575425

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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00044.7 0.5kb upstream 0.5kb upstream 869 true AmTr_v1.0_scaffold00044: 179854-180722 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00044: 180223-180722 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 0.5kb downstream 0.5kb downstream 869 true AmTr_v1.0_scaffold00044: 179354-180222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00044: 179354-179853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 1.0kb upstream 1.0kb upstream 1369 true AmTr_v1.0_scaffold00044: 179854-181222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00044: 180223-181222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 1.0kb downstream 1.0kb downstream 1369 true AmTr_v1.0_scaffold00044: 178854-180222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00044: 178854-179853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 2.0kb upstream 2.0kb upstream 2369 true AmTr_v1.0_scaffold00044: 179854-182222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00044: 180223-182222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 2.0kb downstream 2.0kb downstream 2369 true AmTr_v1.0_scaffold00044: 177854-180222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00044: 177854-179853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 5.0kb upstream 5.0kb upstream 5369 true AmTr_v1.0_scaffold00044: 179854-185222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00044: 180223-185222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 5.0kb downstream 5.0kb downstream 5369 true AmTr_v1.0_scaffold00044: 174854-180222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00044: 174854-179853 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 10.0kb upstream 10.0kb upstream 10369 true AmTr_v1.0_scaffold00044: 179854-190222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00044: 180223-190222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 10.0kb downstream 10.0kb downstream 10369 true AmTr_v1.0_scaffold00044: 169854-180222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.7 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00044: 169854-179853 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041645 5273 Angiosperm View MSA
121343821 5274 Embryophyte View MSA
123426521 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain