Gene : evm_27.TU.AmTr_v1.0_scaffold00044.53 A. trichopoda v1.0
Defline:  (1 of 3) 6.1.1.14 - Glycine--tRNA ligase / Glycyl-tRNA synthetase Genomic Order:  53
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00044.53 Secondary Identifier:  ? PAC:31575545
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda TRNA-CHARGING-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00044.53 0.5kb upstream 0.5kb upstream 7397 true AmTr_v1.0_scaffold00044: 932776-940172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00044: 939673-940172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 0.5kb downstream 0.5kb downstream 7397 true AmTr_v1.0_scaffold00044: 932276-939672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00044: 932276-932775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 1.0kb upstream 1.0kb upstream 7897 true AmTr_v1.0_scaffold00044: 932776-940672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00044: 939673-940672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 1.0kb downstream 1.0kb downstream 7897 true AmTr_v1.0_scaffold00044: 931776-939672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00044: 931776-932775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 2.0kb upstream 2.0kb upstream 8897 true AmTr_v1.0_scaffold00044: 932776-941672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00044: 939673-941672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 2.0kb downstream 2.0kb downstream 8897 true AmTr_v1.0_scaffold00044: 930776-939672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00044: 930776-932775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 5.0kb upstream 5.0kb upstream 11897 true AmTr_v1.0_scaffold00044: 932776-944672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00044: 939673-944672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 5.0kb downstream 5.0kb downstream 11897 true AmTr_v1.0_scaffold00044: 927776-939672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00044: 927776-932775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 10.0kb upstream 10.0kb upstream 16897 true AmTr_v1.0_scaffold00044: 932776-949672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00044: 939673-949672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 10.0kb downstream 10.0kb downstream 16897 true AmTr_v1.0_scaffold00044: 922776-939672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.53 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00044: 922776-932775 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047180 5273 Angiosperm View MSA
121348773 5274 Embryophyte View MSA
123423981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain